STAnalyzer: Transparent Spatial Transcriptomics Analysis via…

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2026
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  • DOI 10.64898/2026.04.06.716827
  • OpenAlex ID W7152421699
  • Type Preprint
  • Published 09 Apr 2026
  • Source bioRxiv (Cold Spring Harbor Laboratory)
  • Publisher Cold Spring Harbor Laboratory
  • Countries 1
  • Institutions 1
  • Added 10 Apr 2026
  • Updated 22 Oct 2026
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STAnalyzer: Transparent Spatial Transcriptomics Analysis via an Agentic Architecture

Preprint 2026 Green

Abstract Spatial transcriptomics enables high-resolution profiling of gene expression within spatial contexts, yet its potential is often hindered by fragmented toolchains, intricate parameters, and cognitive bottlenecks of interpreting high-dimensional data. While recent Large Language Model agents have attempted to automate this process, they remain constrained by rigid execution logic, lack mul…

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9 authors
#AuthorInstitutionsORCID
1 Hanwen Luo Shandong University (CN)
2 Liliang Liu Shandong University (CN)
3 Zhijin XING Shandong University (CN) —
4 Xinlu Li Shandong University (CN)
5 Xuerui Zhang Shandong University (CN) —
6 Wei Du Shandong University (CN)
7 Bin Liu Shandong University (CN) —
8 Jun Wang Shandong University (CN)
9 Guoxian Yu Corresponding Shandong University (CN)

Data: OpenAlex